I think there's simply too many possibilities to not accept cybernetic individuals. With as many clones as we can have, who's to say one doesn't have a combat frame? Who's to say that all augmentations are cybernetic as opposed to biological inheritance from clone to clone? Who's to say super cybernetic pilots weren't modified in specific ways to better fly their ship? Hell, who's to say some pilots don't LIKE just flying around ships and WANT to get into the action ground side or station side right along with their men.
My point is, not all eggers are aloof demi-gods who send mortals to do their bidding while they fart about in a shiny spaceship wringing their gooie hands together in sadistic delight as they watch their servants do their bidding DANCE PUPPETS DANCE...
....ahem....
Some capsuleers want to get involved with their men and women, leading them not just by ship command but on the battlefield. To me, a good, caring, and dependable commander worthy of holding leadership and people following him will be the first one to charge into a situation with his people. Of course that's not everyone, hurr hurr dark universe hurr hurr. But personally, I like to think that those who do mod themselves to fight alongside their people are the kind of eggers worthy of keeping and learning about more. They're the kind of people Anslo can admire despite faction affiliation.
They are not afraid.
EDIT: Also, if wide spread cyberization is so readily available in other universe settings such as say, Ghost in The Shell, where they haven't even exploited space yet and are only in the year 2027 A.D., why can't eggers do the same? A brain may not be implanted because well, it may not even be a brain anymore. It might be a big hunk of hardware with the pilots 'ghost' copied into it. Would make transmission of consciousness AND command signals a hell of a lot easier to send.